WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H05L14.2c.1 Sequence Name  H05L14.2c.1
Length (nt)  5069   Chromosome Location  I: 7984889-7992715
Chromosome . Primary Identifier  I Chromosome Location . Start  7984889
Chromosome Location . End  7992715 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H05L14.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010367 H05L14.2 H05L14.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H05L14.2c H05L14.2c 4827   I: 7985336-7985586

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H05L14.2c.1 7984889 7992715 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon20652   148   I: 7984889-7985036 Caenorhabditis elegans
Exon20655   62   I: 7985087-7985148 Caenorhabditis elegans
Exon20658   283   I: 7985304-7985586 Caenorhabditis elegans
Exon20664   81   I: 7985641-7985721 Caenorhabditis elegans
Exon20668   135   I: 7986392-7986526 Caenorhabditis elegans
Exon20673   139   I: 7987058-7987196 Caenorhabditis elegans
Exon20678   1862   I: 7987239-7989100 Caenorhabditis elegans
Exon20683   315   I: 7989287-7989601 Caenorhabditis elegans
Exon20688   427   I: 7989870-7990296 Caenorhabditis elegans
Exon20693   425   I: 7990716-7991140 Caenorhabditis elegans
Exon20698   393   I: 7991188-7991580 Caenorhabditis elegans
Exon20703   607   I: 7991828-7992434 Caenorhabditis elegans
Exon20706   192   I: 7992524-7992715 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H05L14.2c.1 7984889 7992715 1

1 Sequence

Length
5069

1 Sequence Ontology Term

Identifier Name Description
transcript