WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H05L14.2a.1 Sequence Name  H05L14.2a.1
Length (nt)  5497   Chromosome Location  I: 7984904-7993161
Chromosome . Primary Identifier  I Chromosome Location . Start  7984904
Chromosome Location . End  7993161 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H05L14.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010367 H05L14.2 H05L14.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H05L14.2a H05L14.2a 4875   I: 7985130-7985148

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H05L14.2a.1 7984904 7993161 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon20653   133   I: 7984904-7985036 Caenorhabditis elegans
Exon20654   62   I: 7985087-7985148 Caenorhabditis elegans
Exon20659   274   I: 7985313-7985586 Caenorhabditis elegans
Exon20662   81   I: 7985641-7985721 Caenorhabditis elegans
Exon20666   135   I: 7986392-7986526 Caenorhabditis elegans
Exon20671   139   I: 7987058-7987196 Caenorhabditis elegans
Exon20676   1862   I: 7987239-7989100 Caenorhabditis elegans
Exon20681   315   I: 7989287-7989601 Caenorhabditis elegans
Exon20686   427   I: 7989870-7990296 Caenorhabditis elegans
Exon20691   425   I: 7990716-7991140 Caenorhabditis elegans
Exon20696   399   I: 7991182-7991580 Caenorhabditis elegans
Exon20701   607   I: 7991828-7992434 Caenorhabditis elegans
Exon20709   638   I: 7992524-7993161 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H05L14.2a.1 7984904 7993161 1

1 Sequence

Length
5497

1 Sequence Ontology Term

Identifier Name Description
transcript