WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H05L14.2e.1 Sequence Name  H05L14.2e.1
Length (nt)  5304   Chromosome Location  I: 7985130-7993157
Chromosome . Primary Identifier  I Chromosome Location . Start  7985130
Chromosome Location . End  7993157 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H05L14.2e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010367 H05L14.2 H05L14.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H05L14.2e H05L14.2e 4698   I: 7985130-7985148

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H05L14.2e.1 7985130 7993157 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon20656   19   I: 7985130-7985148 Caenorhabditis elegans
Exon20661   274   I: 7985313-7985586 Caenorhabditis elegans
Exon20665   81   I: 7985641-7985721 Caenorhabditis elegans
Exon20669   135   I: 7986392-7986526 Caenorhabditis elegans
Exon20675   139   I: 7987058-7987196 Caenorhabditis elegans
Exon20680   1862   I: 7987239-7989100 Caenorhabditis elegans
Exon20685   315   I: 7989287-7989601 Caenorhabditis elegans
Exon20690   427   I: 7989870-7990296 Caenorhabditis elegans
Exon20695   425   I: 7990716-7991140 Caenorhabditis elegans
Exon20700   393   I: 7991188-7991580 Caenorhabditis elegans
Exon20705   607   I: 7991828-7992434 Caenorhabditis elegans
Exon20710   627   I: 7992531-7993157 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H05L14.2e.1 7985130 7993157 1

1 Sequence

Length
5304

1 Sequence Ontology Term

Identifier Name Description
transcript