WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H05L14.2b.1 Sequence Name  H05L14.2b.1
Length (nt)  5314   Chromosome Location  I: 7985130-7993160
Chromosome . Primary Identifier  I Chromosome Location . Start  7985130
Chromosome Location . End  7993160 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H05L14.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010367 H05L14.2 H05L14.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H05L14.2b H05L14.2b 4869   I: 7985130-7985148

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H05L14.2b.1 7985130 7993160 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon20657   19   I: 7985130-7985148 Caenorhabditis elegans
Exon20660   274   I: 7985313-7985586 Caenorhabditis elegans
Exon20663   81   I: 7985641-7985721 Caenorhabditis elegans
Exon20667   135   I: 7986392-7986526 Caenorhabditis elegans
Exon20672   139   I: 7987058-7987196 Caenorhabditis elegans
Exon20677   1862   I: 7987239-7989100 Caenorhabditis elegans
Exon20682   315   I: 7989287-7989601 Caenorhabditis elegans
Exon20687   427   I: 7989870-7990296 Caenorhabditis elegans
Exon20692   425   I: 7990716-7991140 Caenorhabditis elegans
Exon20697   393   I: 7991188-7991580 Caenorhabditis elegans
Exon20702   607   I: 7991828-7992434 Caenorhabditis elegans
Exon20708   637   I: 7992524-7993160 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H05L14.2b.1 7985130 7993160 1

1 Sequence

Length
5314

1 Sequence Ontology Term

Identifier Name Description
transcript