WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54G4.1a.1 Sequence Name  C54G4.1a.1
Length (nt)  2881   Chromosome Location  I: 8014412-8019577
Chromosome . Primary Identifier  I Chromosome Location . Start  8014412
Chromosome Location . End  8019577 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54G4.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008311 rskn-2 C54G4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54G4.1a C54G4.1a 2319   I: 8014468-8014632

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C54G4.1a.1 8014412 8019577 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon20746   221   I: 8014412-8014632 Caenorhabditis elegans
Exon20747   398   I: 8014903-8015300 Caenorhabditis elegans
Exon20750   147   I: 8015681-8015827 Caenorhabditis elegans
Exon20753   307   I: 8015872-8016178 Caenorhabditis elegans
Exon20756   173   I: 8016284-8016456 Caenorhabditis elegans
Exon20759   232   I: 8016581-8016812 Caenorhabditis elegans
Exon20762   90   I: 8016872-8016961 Caenorhabditis elegans
Exon20766   122   I: 8017134-8017255 Caenorhabditis elegans
Exon20768   109   I: 8017784-8017892 Caenorhabditis elegans
Exon20771   277   I: 8018139-8018415 Caenorhabditis elegans
Exon20775   148   I: 8018470-8018617 Caenorhabditis elegans
Exon20780   657   I: 8018921-8019577 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C54G4.1a.1 8014412 8019577 1

1 Sequence

Length
2881

1 Sequence Ontology Term

Identifier Name Description
transcript