WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54G4.7.1 Sequence Name  C54G4.7.1
Length (nt)  1675   Chromosome Location  I: 8019501-8022646
Chromosome . Primary Identifier  I Chromosome Location . Start  8019501
Chromosome Location . End  8022646 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54G4.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008317 C54G4.7 C54G4.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54G4.7 C54G4.7 1137   I: 8020854-8020975

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C54G4.7.1 8019501 8022646 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon20783   162   I: 8019501-8019662 Caenorhabditis elegans
Exon20785   139   I: 8019712-8019850 Caenorhabditis elegans
Exon20791   190   I: 8020786-8020975 Caenorhabditis elegans
Exon20794   88   I: 8021044-8021131 Caenorhabditis elegans
Exon20797   179   I: 8021181-8021359 Caenorhabditis elegans
Exon20801   917   I: 8021730-8022646 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C54G4.7.1 8019501 8022646 1

1 Sequence

Length
1675

1 Sequence Ontology Term

Identifier Name Description
transcript