WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54G4.6.1 Sequence Name  C54G4.6.1
Length (nt)  745   Chromosome Location  I: 8019578-8020901
Chromosome . Primary Identifier  I Chromosome Location . Start  8019578
Chromosome Location . End  8020901 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54G4.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008316 dod-18 C54G4.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54G4.6 C54G4.6 594   I: 8019695-8019830

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C54G4.6.1 8019578 8020901 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon20784   253   I: 8019578-8019830 Caenorhabditis elegans
Exon20787   153   I: 8020101-8020253 Caenorhabditis elegans
Exon20788   104   I: 8020297-8020400 Caenorhabditis elegans
Exon20789   135   I: 8020620-8020754 Caenorhabditis elegans
Exon20793   100   I: 8020802-8020901 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C54G4.6.1 8019578 8020901 -1

1 Sequence

Length
745

1 Sequence Ontology Term

Identifier Name Description
transcript