WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54G4.9.1 Sequence Name  C54G4.9.1
Length (nt)  1500   Chromosome Location  I: 8024880-8026525
Chromosome . Primary Identifier  I Chromosome Location . Start  8024880
Chromosome Location . End  8026525 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54G4.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008318 C54G4.9 C54G4.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54G4.9 C54G4.9 1395   I: 8024979-8025419

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C54G4.9.1 8024880 8026525 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon20809   540   I: 8024880-8025419 Caenorhabditis elegans
Exon20810   383   I: 8025469-8025851 Caenorhabditis elegans
Exon20811   260   I: 8025901-8026160 Caenorhabditis elegans
Exon20812   317   I: 8026209-8026525 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C54G4.9.1 8024880 8026525 -1

1 Sequence

Length
1500

1 Sequence Ontology Term

Identifier Name Description
transcript