WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K04G2.11.1 Sequence Name  K04G2.11.1
Length (nt)  506   Chromosome Location  I: 8039879-8040526
Chromosome . Primary Identifier  I Chromosome Location . Start  8039879
Chromosome Location . End  8040526 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K04G2.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010569 scbp-2 K04G2.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K04G2.11 K04G2.11 462   I: 8039914-8040000

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K04G2.11.1 8039879 8040526 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon20878   122   I: 8039879-8040000 Caenorhabditis elegans
Exon20879   149   I: 8040047-8040195 Caenorhabditis elegans
Exon20880   115   I: 8040244-8040358 Caenorhabditis elegans
Exon20881   120   I: 8040407-8040526 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K04G2.11.1 8039879 8040526 -1

1 Sequence

Length
506

1 Sequence Ontology Term

Identifier Name Description
transcript