WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K04G2.6.1 Sequence Name  K04G2.6.1
Length (nt)  2244   Chromosome Location  I: 8040799-8043278
Chromosome . Primary Identifier  I Chromosome Location . Start  8040799
Chromosome Location . End  8043278 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K04G2.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010565 vacl-14 K04G2.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K04G2.6 K04G2.6 2085   I: 8040800-8040900

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K04G2.6.1 8040799 8043278 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon20882   102   I: 8040799-8040900 Caenorhabditis elegans
Exon20883   151   I: 8040945-8041095 Caenorhabditis elegans
Exon20884   1525   I: 8041141-8042665 Caenorhabditis elegans
Exon20885   145   I: 8042765-8042909 Caenorhabditis elegans
Exon20886   321   I: 8042958-8043278 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K04G2.6.1 8040799 8043278 1

1 Sequence

Length
2244

1 Sequence Ontology Term

Identifier Name Description
transcript