WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F18C12.2b.1 Sequence Name  F18C12.2b.1
Length (nt)  7363   Chromosome Location  I: 8083576-8095610
Chromosome . Primary Identifier  I Chromosome Location . Start  8083576
Chromosome Location . End  8095610 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F18C12.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004378 rme-8 F18C12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F18C12.2b F18C12.2b 6816   I: 8083630-8083700

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F18C12.2b.1 8083576 8095610 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon20980   125   I: 8083576-8083700 Caenorhabditis elegans
Exon20983   76   I: 8083746-8083821 Caenorhabditis elegans
Exon20985   201   I: 8083871-8084071 Caenorhabditis elegans
Exon20987   198   I: 8084289-8084486 Caenorhabditis elegans
Exon20989   303   I: 8084536-8084838 Caenorhabditis elegans
Exon20991   259   I: 8085095-8085353 Caenorhabditis elegans
Exon20993   467   I: 8085407-8085873 Caenorhabditis elegans
Exon20995   411   I: 8086176-8086586 Caenorhabditis elegans
Exon20997   581   I: 8086938-8087518 Caenorhabditis elegans
Exon20999   678   I: 8087588-8088265 Caenorhabditis elegans
Exon21001   640   I: 8088580-8089219 Caenorhabditis elegans
Exon21003   116   I: 8089369-8089484 Caenorhabditis elegans
Exon21005   218   I: 8089592-8089809 Caenorhabditis elegans
Exon21007   188   I: 8090275-8090462 Caenorhabditis elegans
Exon21009   192   I: 8090506-8090697 Caenorhabditis elegans
Exon21011   453   I: 8091131-8091583 Caenorhabditis elegans
Exon21013   108   I: 8091875-8091982 Caenorhabditis elegans
Exon21015   211   I: 8092071-8092281 Caenorhabditis elegans
Exon21018   454   I: 8093337-8093790 Caenorhabditis elegans
Exon21020   291   I: 8093858-8094148 Caenorhabditis elegans
Exon21022   584   I: 8094228-8094811 Caenorhabditis elegans
Exon21024   609   I: 8095002-8095610 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F18C12.2b.1 8083576 8095610 1

1 Sequence

Length
7363

1 Sequence Ontology Term

Identifier Name Description
transcript