WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F18C12.2a.1 Sequence Name  F18C12.2a.1
Length (nt)  7378   Chromosome Location  I: 8083583-8095608
Chromosome . Primary Identifier  I Chromosome Location . Start  8083583
Chromosome Location . End  8095608 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F18C12.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004378 rme-8 F18C12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F18C12.2a F18C12.2a 6840   I: 8083630-8083700

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F18C12.2a.1 8083583 8095608 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon20981   118   I: 8083583-8083700 Caenorhabditis elegans
Exon20982   76   I: 8083746-8083821 Caenorhabditis elegans
Exon20984   201   I: 8083871-8084071 Caenorhabditis elegans
Exon20986   198   I: 8084289-8084486 Caenorhabditis elegans
Exon20988   303   I: 8084536-8084838 Caenorhabditis elegans
Exon20990   259   I: 8085095-8085353 Caenorhabditis elegans
Exon20992   467   I: 8085407-8085873 Caenorhabditis elegans
Exon20994   411   I: 8086176-8086586 Caenorhabditis elegans
Exon20996   581   I: 8086938-8087518 Caenorhabditis elegans
Exon20998   678   I: 8087588-8088265 Caenorhabditis elegans
Exon21000   640   I: 8088580-8089219 Caenorhabditis elegans
Exon21002   116   I: 8089369-8089484 Caenorhabditis elegans
Exon21004   218   I: 8089592-8089809 Caenorhabditis elegans
Exon21006   188   I: 8090275-8090462 Caenorhabditis elegans
Exon21008   192   I: 8090506-8090697 Caenorhabditis elegans
Exon21010   453   I: 8091131-8091583 Caenorhabditis elegans
Exon21012   108   I: 8091875-8091982 Caenorhabditis elegans
Exon21014   211   I: 8092071-8092281 Caenorhabditis elegans
Exon21016   24   I: 8092392-8092415 Caenorhabditis elegans
Exon21017   454   I: 8093337-8093790 Caenorhabditis elegans
Exon21019   291   I: 8093858-8094148 Caenorhabditis elegans
Exon21021   584   I: 8094228-8094811 Caenorhabditis elegans
Exon21023   607   I: 8095002-8095608 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F18C12.2a.1 8083583 8095608 1

1 Sequence

Length
7378

1 Sequence Ontology Term

Identifier Name Description
transcript