WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T28B8.3a Sequence Name  T28B8.3a
Length (nt)  5670   Chromosome Location  I: 8151862-8151870
Chromosome . Primary Identifier  I Chromosome Location . Start  8151862
Chromosome Location . End  8151870
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28B8.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53941 T28B8.3, isoform a 220.2 1889 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00054384
WBRNAi00004335

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T28B8.3a 8151862 8151870 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012114 T28B8.3 T28B8.3 Caenorhabditis elegans

22 Locations


Feature . Primary Identifier
Start End Strand
CDS:T28B8.3a 8151862 8151870 1
CDS:T28B8.3a 8151928 8152043 1
CDS:T28B8.3a 8152103 8152634 1
CDS:T28B8.3a 8152887 8152996 1
CDS:T28B8.3a 8153290 8153475 1
CDS:T28B8.3a 8153522 8153780 1
CDS:T28B8.3a 8153883 8153950 1
CDS:T28B8.3a 8154004 8154649 1
CDS:T28B8.3a 8154704 8154869 1
CDS:T28B8.3a 8154959 8155122 1
CDS:T28B8.3a 8155181 8155443 1
CDS:T28B8.3a 8155613 8155782 1
CDS:T28B8.3a 8155839 8156522 1
CDS:T28B8.3a 8156881 8157421 1
CDS:T28B8.3a 8157529 8157799 1
CDS:T28B8.3a 8157850 8158127 1
CDS:T28B8.3a 8158210 8158332 1
CDS:T28B8.3a 8158377 8158494 1
CDS:T28B8.3a 8158541 8158975 1
CDS:T28B8.3a 8159092 8159238 1
CDS:T28B8.3a 8159290 8159541 1
CDS:T28B8.3a 8159601 8159732 1

1 Sequence

Length
5670

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T28B8.3a.1 T28B8.3a.1 5736   I: 8151862-8159798