WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T28B8.3b.1 Sequence Name  T28B8.3b.1
Length (nt)  1320   Chromosome Location  I: 8158015-8159732
Chromosome . Primary Identifier  I Chromosome Location . Start  8158015
Chromosome Location . End  8159732 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28B8.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012114 T28B8.3 T28B8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28B8.3b T28B8.3b 1320   I: 8158015-8158127

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T28B8.3b.1 8158015 8159732 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon21142   113   I: 8158015-8158127 Caenorhabditis elegans
Exon21144   123   I: 8158210-8158332 Caenorhabditis elegans
Exon21146   118   I: 8158377-8158494 Caenorhabditis elegans
Exon21148   435   I: 8158541-8158975 Caenorhabditis elegans
Exon21150   147   I: 8159092-8159238 Caenorhabditis elegans
Exon21152   252   I: 8159290-8159541 Caenorhabditis elegans
Exon21153   132   I: 8159601-8159732 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T28B8.3b.1 8158015 8159732 1

1 Sequence

Length
1320

1 Sequence Ontology Term

Identifier Name Description
transcript