WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T28B8.4.1 Sequence Name  T28B8.4.1
Length (nt)  5767   Chromosome Location  I: 8160468-8168711
Chromosome . Primary Identifier  I Chromosome Location . Start  8160468
Chromosome Location . End  8168711 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28B8.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012115 T28B8.4 T28B8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28B8.4 T28B8.4 5625   I: 8160512-8160520

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T28B8.4.1 8160468 8168711 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon21155   53   I: 8160468-8160520 Caenorhabditis elegans
Exon21158   116   I: 8160640-8160755 Caenorhabditis elegans
Exon21159   532   I: 8160855-8161386 Caenorhabditis elegans
Exon21160   110   I: 8161580-8161689 Caenorhabditis elegans
Exon21161   186   I: 8161774-8161959 Caenorhabditis elegans
Exon21162   259   I: 8162006-8162264 Caenorhabditis elegans
Exon21163   68   I: 8162522-8162589 Caenorhabditis elegans
Exon21164   646   I: 8162643-8163288 Caenorhabditis elegans
Exon21165   166   I: 8163335-8163500 Caenorhabditis elegans
Exon21166   164   I: 8163914-8164077 Caenorhabditis elegans
Exon21167   263   I: 8164127-8164389 Caenorhabditis elegans
Exon21168   170   I: 8164554-8164723 Caenorhabditis elegans
Exon21169   687   I: 8164774-8165460 Caenorhabditis elegans
Exon21170   541   I: 8165735-8166275 Caenorhabditis elegans
Exon21171   271   I: 8166352-8166622 Caenorhabditis elegans
Exon21172   278   I: 8166672-8166949 Caenorhabditis elegans
Exon21173   123   I: 8167029-8167151 Caenorhabditis elegans
Exon21174   118   I: 8167196-8167313 Caenorhabditis elegans
Exon21175   123   I: 8167360-8167482 Caenorhabditis elegans
Exon21176   258   I: 8167525-8167782 Caenorhabditis elegans
Exon21177   153   I: 8167924-8168076 Caenorhabditis elegans
Exon21178   252   I: 8168183-8168434 Caenorhabditis elegans
Exon21179   230   I: 8168482-8168711 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T28B8.4.1 8160468 8168711 1

1 Sequence

Length
5767

1 Sequence Ontology Term

Identifier Name Description
transcript