WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08A10.1j.1 Sequence Name  F08A10.1j.1
Length (nt)  2568   Chromosome Location  I: 8174888-8208557
Chromosome . Primary Identifier  I Chromosome Location . Start  8174888
Chromosome Location . End  8208557 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08A10.1j.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008570 kcnl-2 F08A10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08A10.1j F08A10.1j 2568   I: 8174888-8175055

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08A10.1j.1 8174888 8208557 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon21183   168   I: 8174888-8175055 Caenorhabditis elegans
Exon21185   86   I: 8176377-8176462 Caenorhabditis elegans
Exon21188   88   I: 8176619-8176706 Caenorhabditis elegans
Exon21189   115   I: 8176754-8176868 Caenorhabditis elegans
Exon21199   96   I: 8183285-8183380 Caenorhabditis elegans
Exon21203   69   I: 8186676-8186744 Caenorhabditis elegans
Exon21207   86   I: 8190464-8190549 Caenorhabditis elegans
Exon21221   112   I: 8196208-8196319 Caenorhabditis elegans
Exon21230   83   I: 8196540-8196622 Caenorhabditis elegans
Exon21240   81   I: 8199617-8199697 Caenorhabditis elegans
Exon21243   118   I: 8199817-8199934 Caenorhabditis elegans
Exon21262   127   I: 8206272-8206398 Caenorhabditis elegans
Exon21273   89   I: 8206456-8206544 Caenorhabditis elegans
Exon21284   146   I: 8206594-8206739 Caenorhabditis elegans
Exon21295   239   I: 8206835-8207073 Caenorhabditis elegans
Exon21306   427   I: 8207119-8207545 Caenorhabditis elegans
Exon21317   128   I: 8207603-8207730 Caenorhabditis elegans
Exon21328   70   I: 8207781-8207850 Caenorhabditis elegans
Exon21332   136   I: 8207895-8208030 Caenorhabditis elegans
Exon21345   104   I: 8208454-8208557 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08A10.1j.1 8174888 8208557 1

1 Sequence

Length
2568

1 Sequence Ontology Term

Identifier Name Description
transcript