WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08A10.1f.1 Sequence Name  F08A10.1f.1
Length (nt)  2566   Chromosome Location  I: 8176170-8208739
Chromosome . Primary Identifier  I Chromosome Location . Start  8176170
Chromosome Location . End  8208739 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08A10.1f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008570 kcnl-2 F08A10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08A10.1f F08A10.1f 2007   I: 8183359-8183380

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08A10.1f.1 8176170 8208739 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon21184   15   I: 8176170-8176184 Caenorhabditis elegans
Exon21186   44   I: 8176419-8176462 Caenorhabditis elegans
Exon21187   60   I: 8176619-8176678 Caenorhabditis elegans
Exon21191   113   I: 8179906-8180018 Caenorhabditis elegans
Exon21197   96   I: 8183285-8183380 Caenorhabditis elegans
Exon21201   69   I: 8186676-8186744 Caenorhabditis elegans
Exon21205   86   I: 8190464-8190549 Caenorhabditis elegans
Exon21217   112   I: 8196208-8196319 Caenorhabditis elegans
Exon21226   83   I: 8196540-8196622 Caenorhabditis elegans
Exon21236   81   I: 8199617-8199697 Caenorhabditis elegans
Exon21247   139   I: 8199817-8199955 Caenorhabditis elegans
Exon21258   127   I: 8206272-8206398 Caenorhabditis elegans
Exon21269   89   I: 8206456-8206544 Caenorhabditis elegans
Exon21280   146   I: 8206594-8206739 Caenorhabditis elegans
Exon21291   239   I: 8206835-8207073 Caenorhabditis elegans
Exon21302   427   I: 8207119-8207545 Caenorhabditis elegans
Exon21313   128   I: 8207603-8207730 Caenorhabditis elegans
Exon21324   70   I: 8207781-8207850 Caenorhabditis elegans
Exon21338   156   I: 8207895-8208050 Caenorhabditis elegans
Exon21349   286   I: 8208454-8208739 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08A10.1f.1 8176170 8208739 1

1 Sequence

Length
2566

1 Sequence Ontology Term

Identifier Name Description
transcript