WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08A10.1f.2 Sequence Name  F08A10.1f.2
Length (nt)  2452   Chromosome Location  I: 8179901-8208739
Chromosome . Primary Identifier  I Chromosome Location . Start  8179901
Chromosome Location . End  8208739 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08A10.1f.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008570 kcnl-2 F08A10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08A10.1f F08A10.1f 2007   I: 8183359-8183380

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08A10.1f.2 8179901 8208739 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon21190   118   I: 8179901-8180018 Caenorhabditis elegans
Exon21198   96   I: 8183285-8183380 Caenorhabditis elegans
Exon21202   69   I: 8186676-8186744 Caenorhabditis elegans
Exon21206   86   I: 8190464-8190549 Caenorhabditis elegans
Exon21218   112   I: 8196208-8196319 Caenorhabditis elegans
Exon21227   83   I: 8196540-8196622 Caenorhabditis elegans
Exon21237   81   I: 8199617-8199697 Caenorhabditis elegans
Exon21248   139   I: 8199817-8199955 Caenorhabditis elegans
Exon21259   127   I: 8206272-8206398 Caenorhabditis elegans
Exon21270   89   I: 8206456-8206544 Caenorhabditis elegans
Exon21281   146   I: 8206594-8206739 Caenorhabditis elegans
Exon21292   239   I: 8206835-8207073 Caenorhabditis elegans
Exon21303   427   I: 8207119-8207545 Caenorhabditis elegans
Exon21314   128   I: 8207603-8207730 Caenorhabditis elegans
Exon21325   70   I: 8207781-8207850 Caenorhabditis elegans
Exon21339   156   I: 8207895-8208050 Caenorhabditis elegans
Exon21350   286   I: 8208454-8208739 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08A10.1f.2 8179901 8208739 1

1 Sequence

Length
2452

1 Sequence Ontology Term

Identifier Name Description
transcript