WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08A10.2.1 Sequence Name  F08A10.2.1
Length (nt)  1099   Chromosome Location  I: 8181318-8182933
Chromosome . Primary Identifier  I Chromosome Location . Start  8181318
Chromosome Location . End  8182933 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08A10.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00023411 srz-3 F08A10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08A10.2 F08A10.2 1080   I: 8181337-8181786

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08A10.2.1 8181318 8182933 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon21193   469   I: 8181318-8181786 Caenorhabditis elegans
Exon21194   376   I: 8181954-8182329 Caenorhabditis elegans
Exon21195   104   I: 8182374-8182477 Caenorhabditis elegans
Exon21196   150   I: 8182784-8182933 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08A10.2.1 8181318 8182933 -1

1 Sequence

Length
1099

1 Sequence Ontology Term

Identifier Name Description
transcript