WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08A10.1h.1 Sequence Name  F08A10.1h.1
Length (nt)  1908   Chromosome Location  I: 8190472-8208486
Chromosome . Primary Identifier  I Chromosome Location . Start  8190472
Chromosome Location . End  8208486 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08A10.1h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008570 kcnl-2 F08A10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08A10.1h F08A10.1h 1908   I: 8190472-8190549

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08A10.1h.1 8190472 8208486 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon21209   78   I: 8190472-8190549 Caenorhabditis elegans
Exon21219   112   I: 8196208-8196319 Caenorhabditis elegans
Exon21228   83   I: 8196540-8196622 Caenorhabditis elegans
Exon21238   81   I: 8199617-8199697 Caenorhabditis elegans
Exon21249   139   I: 8199817-8199955 Caenorhabditis elegans
Exon21260   127   I: 8206272-8206398 Caenorhabditis elegans
Exon21271   89   I: 8206456-8206544 Caenorhabditis elegans
Exon21282   146   I: 8206594-8206739 Caenorhabditis elegans
Exon21293   239   I: 8206835-8207073 Caenorhabditis elegans
Exon21304   427   I: 8207119-8207545 Caenorhabditis elegans
Exon21315   128   I: 8207603-8207730 Caenorhabditis elegans
Exon21326   70   I: 8207781-8207850 Caenorhabditis elegans
Exon21340   156   I: 8207895-8208050 Caenorhabditis elegans
Exon21343   33   I: 8208454-8208486 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08A10.1h.1 8190472 8208486 1

1 Sequence

Length
1908

1 Sequence Ontology Term

Identifier Name Description
transcript