WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08A10.1a.1 Sequence Name  F08A10.1a.1
Length (nt)  2162   Chromosome Location  I: 8196059-8208739
Chromosome . Primary Identifier  I Chromosome Location . Start  8196059
Chromosome Location . End  8208739 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08A10.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008570 kcnl-2 F08A10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08A10.1a F08A10.1a 1908   I: 8196060-8196137

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08A10.1a.1 8196059 8208739 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon21210   79   I: 8196059-8196137 Caenorhabditis elegans
Exon21214   112   I: 8196208-8196319 Caenorhabditis elegans
Exon21223   83   I: 8196540-8196622 Caenorhabditis elegans
Exon21233   81   I: 8199617-8199697 Caenorhabditis elegans
Exon21245   139   I: 8199817-8199955 Caenorhabditis elegans
Exon21253   127   I: 8206272-8206398 Caenorhabditis elegans
Exon21264   89   I: 8206456-8206544 Caenorhabditis elegans
Exon21275   146   I: 8206594-8206739 Caenorhabditis elegans
Exon21286   239   I: 8206835-8207073 Caenorhabditis elegans
Exon21297   427   I: 8207119-8207545 Caenorhabditis elegans
Exon21308   128   I: 8207603-8207730 Caenorhabditis elegans
Exon21319   70   I: 8207781-8207850 Caenorhabditis elegans
Exon21334   156   I: 8207895-8208050 Caenorhabditis elegans
Exon21347   286   I: 8208454-8208739 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08A10.1a.1 8196059 8208739 1

1 Sequence

Length
2162

1 Sequence Ontology Term

Identifier Name Description
transcript