WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08A10.1b.1 Sequence Name  F08A10.1b.1
Length (nt)  2359   Chromosome Location  I: 8205464-8208739
Chromosome . Primary Identifier  I Chromosome Location . Start  8205464
Chromosome Location . End  8208739 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08A10.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008570 kcnl-2 F08A10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08A10.1b F08A10.1b 1968   I: 8205602-8206154

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08A10.1b.1 8205464 8208739 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon21251   691   I: 8205464-8206154 Caenorhabditis elegans
Exon21254   127   I: 8206272-8206398 Caenorhabditis elegans
Exon21265   89   I: 8206456-8206544 Caenorhabditis elegans
Exon21276   146   I: 8206594-8206739 Caenorhabditis elegans
Exon21287   239   I: 8206835-8207073 Caenorhabditis elegans
Exon21298   427   I: 8207119-8207545 Caenorhabditis elegans
Exon21309   128   I: 8207603-8207730 Caenorhabditis elegans
Exon21320   70   I: 8207781-8207850 Caenorhabditis elegans
Exon21335   156   I: 8207895-8208050 Caenorhabditis elegans
Exon21348   286   I: 8208454-8208739 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08A10.1b.1 8205464 8208739 1

1 Sequence

Length
2359

1 Sequence Ontology Term

Identifier Name Description
transcript