WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T02E1.3a.1 Sequence Name  T02E1.3a.1
Length (nt)  2392   Chromosome Location  I: 8214382-8217996
Chromosome . Primary Identifier  I Chromosome Location . Start  8214382
Chromosome Location . End  8217996 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T02E1.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011376 gla-3 T02E1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T02E1.3a T02E1.3a 1941   I: 8214410-8214444

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T02E1.3a.1 8214382 8217996 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon21377   63   I: 8214382-8214444 Caenorhabditis elegans
Exon21378   73   I: 8214492-8214564 Caenorhabditis elegans
Exon21382   99   I: 8215030-8215128 Caenorhabditis elegans
Exon21385   336   I: 8215175-8215510 Caenorhabditis elegans
Exon21388   121   I: 8215568-8215688 Caenorhabditis elegans
Exon21391   353   I: 8216035-8216387 Caenorhabditis elegans
Exon21394   76   I: 8216463-8216538 Caenorhabditis elegans
Exon21397   459   I: 8216599-8217057 Caenorhabditis elegans
Exon21400   249   I: 8217130-8217378 Caenorhabditis elegans
Exon21405   563   I: 8217434-8217996 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T02E1.3a.1 8214382 8217996 1

1 Sequence

Length
2392

1 Sequence Ontology Term

Identifier Name Description
transcript