WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T02E1.3b.1 Sequence Name  T02E1.3b.1
Length (nt)  2040   Chromosome Location  I: 8214698-8217573
Chromosome . Primary Identifier  I Chromosome Location . Start  8214698
Chromosome Location . End  8217573 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T02E1.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011376 gla-3 T02E1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T02E1.3b T02E1.3b 2040   I: 8214698-8214748

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T02E1.3b.1 8214698 8217573 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon21380   51   I: 8214698-8214748 Caenorhabditis elegans
Exon21381   162   I: 8214794-8214955 Caenorhabditis elegans
Exon21383   93   I: 8215036-8215128 Caenorhabditis elegans
Exon21386   336   I: 8215175-8215510 Caenorhabditis elegans
Exon21389   121   I: 8215568-8215688 Caenorhabditis elegans
Exon21392   353   I: 8216035-8216387 Caenorhabditis elegans
Exon21395   76   I: 8216463-8216538 Caenorhabditis elegans
Exon21398   459   I: 8216599-8217057 Caenorhabditis elegans
Exon21401   249   I: 8217130-8217378 Caenorhabditis elegans
Exon21403   140   I: 8217434-8217573 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T02E1.3b.1 8214698 8217573 1

1 Sequence

Length
2040

1 Sequence Ontology Term

Identifier Name Description
transcript