WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52B5.7.1 Sequence Name  F52B5.7.1
Length (nt)  1190   Chromosome Location  I: 8313121-8315432
Chromosome . Primary Identifier  I Chromosome Location . Start  8313121
Chromosome Location . End  8315432 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52B5.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009923 F52B5.7 F52B5.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52B5.7 F52B5.7 876   I: 8313321-8313591

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F52B5.7.1 8313121 8315432 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon21650   471   I: 8313121-8313591 Caenorhabditis elegans
Exon21651   412   I: 8314155-8314566 Caenorhabditis elegans
Exon21652   124   I: 8314649-8314772 Caenorhabditis elegans
Exon21653   183   I: 8315250-8315432 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F52B5.7.1 8313121 8315432 -1

1 Sequence

Length
1190

1 Sequence Ontology Term

Identifier Name Description
transcript