WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F52B5.3 Sequence Name  F52B5.3
Length (nt)  4278   Chromosome Location  I: 8318574-8318639
Chromosome . Primary Identifier  I Chromosome Location . Start  8318574
Chromosome Location . End  8318639
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52B5.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE05718 YTHC-2 162.5 1425 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00047922
WBRNAi00003736
WBRNAi00007901
WBRNAi00075513
WBRNAi00116960

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F52B5.3 8318574 8318639 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009922 ythc-2 F52B5.3 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:F52B5.3 8318574 8318639 -1
CDS:F52B5.3 8318772 8319383 -1
CDS:F52B5.3 8319430 8319534 -1
CDS:F52B5.3 8319581 8319690 -1
CDS:F52B5.3 8319738 8319973 -1
CDS:F52B5.3 8320184 8320580 -1
CDS:F52B5.3 8320627 8321263 -1
CDS:F52B5.3 8321489 8321614 -1
CDS:F52B5.3 8321659 8321955 -1
CDS:F52B5.3 8322039 8322414 -1
CDS:F52B5.3 8322468 8322977 -1
CDS:F52B5.3 8323034 8323306 -1
CDS:F52B5.3 8323357 8323824 -1
CDS:F52B5.3 8323919 8323983 -1

1 Sequence

Length
4278

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F52B5.3.1 F52B5.3.1 4509   I: 8318347-8323987