WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52B5.5a.1 Sequence Name  F52B5.5a.1
Length (nt)  2093   Chromosome Location  I: 8324295-8328859
Chromosome . Primary Identifier  I Chromosome Location . Start  8324295
Chromosome Location . End  8328859 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52B5.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000467 cep-1 F52B5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52B5.5a F52B5.5a 1935   I: 8324301-8324340

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F52B5.5a.1 8324295 8328859 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon21675   46   I: 8324295-8324340 Caenorhabditis elegans
Exon21676   80   I: 8324392-8324471 Caenorhabditis elegans
Exon21680   74   I: 8324524-8324597 Caenorhabditis elegans
Exon21684   163   I: 8324649-8324811 Caenorhabditis elegans
Exon21689   93   I: 8324937-8325029 Caenorhabditis elegans
Exon21692   161   I: 8325074-8325234 Caenorhabditis elegans
Exon21696   238   I: 8325460-8325697 Caenorhabditis elegans
Exon21699   166   I: 8326199-8326364 Caenorhabditis elegans
Exon21702   142   I: 8326809-8326950 Caenorhabditis elegans
Exon21705   214   I: 8327463-8327676 Caenorhabditis elegans
Exon21710   237   I: 8328031-8328267 Caenorhabditis elegans
Exon21715   122   I: 8328333-8328454 Caenorhabditis elegans
Exon21724   357   I: 8328503-8328859 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F52B5.5a.1 8324295 8328859 1

1 Sequence

Length
2093

1 Sequence Ontology Term

Identifier Name Description
transcript