WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F52B5.6 Sequence Name  F52B5.6
Length (nt)  441   Chromosome Location  I: 8329114-8329215
Chromosome . Primary Identifier  I Chromosome Location . Start  8329114
Chromosome Location . End  8329215
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52B5.6

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE05721 RPL-23A.2 16.3 146 Caenorhabditis elegans
 

Other

17 RNAi

WormBase ID
WBRNAi00025565
WBRNAi00025566
WBRNAi00085333
WBRNAi00077298
WBRNAi00077311
WBRNAi00086423
WBRNAi00032586
WBRNAi00047925
WBRNAi00061349
WBRNAi00061350
WBRNAi00081422
WBRNAi00071031
WBRNAi00000060
WBRNAi00086421
WBRNAi00116647
WBRNAi00069358
WBRNAi00069359

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F52B5.6 8329114 8329215 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004439 rpl-23A.2 F52B5.6 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:F52B5.6 8329114 8329215 -1
CDS:F52B5.6 8329260 8329452 -1
CDS:F52B5.6 8329500 8329645 -1

1 Sequence

Length
441

1 Sequence Ontology Term

Identifier Name Description
CDS  

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F52B5.6.1 F52B5.6.1 495   I: 8329062-8329647
Transcript:F52B5.6.2 F52B5.6.2 492   I: 8329065-8329647
Transcript:F52B5.6.3 F52B5.6.3 491   I: 8329066-8329647
Transcript:F52B5.6.4 F52B5.6.4 490   I: 8329067-8329647