WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52B5.6.4 Sequence Name  F52B5.6.4
Length (nt)  490   Chromosome Location  I: 8329067-8329647
Chromosome . Primary Identifier  I Chromosome Location . Start  8329067
Chromosome Location . End  8329647 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52B5.6.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004439 rpl-23A.2 F52B5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52B5.6 F52B5.6 441   I: 8329114-8329215

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F52B5.6.4 8329067 8329647 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon21728   149   I: 8329067-8329215 Caenorhabditis elegans
Exon21732   193   I: 8329260-8329452 Caenorhabditis elegans
Exon21736   148   I: 8329500-8329647 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F52B5.6.4 8329067 8329647 -1

1 Sequence

Length
490

1 Sequence Ontology Term

Identifier Name Description
transcript