WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F16D3.2.2 Sequence Name  F16D3.2.2
Length (nt)  2560   Chromosome Location  I: 8358248-8363855
Chromosome . Primary Identifier  I Chromosome Location . Start  8358248
Chromosome Location . End  8363855 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F16D3.2.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004684 rsd-6 F16D3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F16D3.2 F16D3.2 2070   I: 8358724-8358807

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F16D3.2.2 8358248 8363855 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon21773   560   I: 8358248-8358807 Caenorhabditis elegans
Exon21776   225   I: 8359333-8359557 Caenorhabditis elegans
Exon21778   142   I: 8359608-8359749 Caenorhabditis elegans
Exon21780   202   I: 8360020-8360221 Caenorhabditis elegans
Exon21782   253   I: 8360924-8361176 Caenorhabditis elegans
Exon21784   100   I: 8361488-8361587 Caenorhabditis elegans
Exon21786   352   I: 8361633-8361984 Caenorhabditis elegans
Exon21788   146   I: 8362217-8362362 Caenorhabditis elegans
Exon21790   178   I: 8362775-8362952 Caenorhabditis elegans
Exon21792   290   I: 8363035-8363324 Caenorhabditis elegans
Exon21793   112   I: 8363744-8363855 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F16D3.2.2 8358248 8363855 -1

1 Sequence

Length
2560

1 Sequence Ontology Term

Identifier Name Description
transcript