WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T19A6.2a Sequence Name  T19A6.2a
Length (nt)  1956   Chromosome Location  I: 8394749-8394863
Chromosome . Primary Identifier  I Chromosome Location . Start  8394749
Chromosome Location . End  8394863
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T19A6.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE32493 NGP-1, isoform a 73.3 651 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00035644
WBRNAi00053485
WBRNAi00001175
WBRNAi00026305
WBRNAi00116783
WBRNAi00004224
WBRNAi00077299
WBRNAi00077312

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T19A6.2a 8394749 8394863 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003596 ngp-1 T19A6.2 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:T19A6.2a 8394749 8394863 1
CDS:T19A6.2a 8394908 8394995 1
CDS:T19A6.2a 8395042 8395136 1
CDS:T19A6.2a 8395189 8395322 1
CDS:T19A6.2a 8395468 8395566 1
CDS:T19A6.2a 8395783 8395986 1
CDS:T19A6.2a 8396589 8396693 1
CDS:T19A6.2a 8396932 8397642 1
CDS:T19A6.2a 8397976 8398287 1
CDS:T19A6.2a 8398359 8398451 1

1 Sequence

Length
1956

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T19A6.2a.1 T19A6.2a.1 2152   I: 8394728-8398626