WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F02E9.10c.1 Sequence Name  F02E9.10c.1
Length (nt)  1502   Chromosome Location  I: 8427090-8429832
Chromosome . Primary Identifier  I Chromosome Location . Start  8427090
Chromosome Location . End  8429832 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F02E9.10c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008533 F02E9.10 F02E9.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F02E9.10c F02E9.10c 1368   I: 8427205-8427254

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F02E9.10c.1 8427090 8429832 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon21970   165   I: 8427090-8427254 Caenorhabditis elegans
Exon21975   126   I: 8427307-8427432 Caenorhabditis elegans
Exon21979   181   I: 8427478-8427658 Caenorhabditis elegans
Exon21983   313   I: 8427907-8428219 Caenorhabditis elegans
Exon21987   103   I: 8428268-8428370 Caenorhabditis elegans
Exon21991   94   I: 8428419-8428512 Caenorhabditis elegans
Exon21994   239   I: 8428772-8429010 Caenorhabditis elegans
Exon21999   101   I: 8429057-8429157 Caenorhabditis elegans
Exon22003   97   I: 8429259-8429355 Caenorhabditis elegans
Exon22007   83   I: 8429750-8429832 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F02E9.10c.1 8427090 8429832 -1

1 Sequence

Length
1502

1 Sequence Ontology Term

Identifier Name Description
transcript