WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F02E9.9a.2 Sequence Name  F02E9.9a.2
Length (nt)  2345   Chromosome Location  I: 8429926-8432980
Chromosome . Primary Identifier  I Chromosome Location . Start  8429926
Chromosome Location . End  8432980 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F02E9.9a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008532 dpt-1 F02E9.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F02E9.9a F02E9.9a 2124   I: 8430098-8430307

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F02E9.9a.2 8429926 8432980 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22008   382   I: 8429926-8430307 Caenorhabditis elegans
Exon22012   152   I: 8430355-8430506 Caenorhabditis elegans
Exon22015   221   I: 8430574-8430794 Caenorhabditis elegans
Exon22018   125   I: 8430847-8430971 Caenorhabditis elegans
Exon22021   156   I: 8431020-8431175 Caenorhabditis elegans
Exon22024   104   I: 8431252-8431355 Caenorhabditis elegans
Exon22027   73   I: 8431399-8431471 Caenorhabditis elegans
Exon22030   122   I: 8431535-8431656 Caenorhabditis elegans
Exon22033   196   I: 8431702-8431897 Caenorhabditis elegans
Exon22036   267   I: 8432020-8432286 Caenorhabditis elegans
Exon22039   132   I: 8432334-8432465 Caenorhabditis elegans
Exon22042   131   I: 8432511-8432641 Caenorhabditis elegans
Exon22045   284   I: 8432697-8432980 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F02E9.9a.2 8429926 8432980 -1

1 Sequence

Length
2345

1 Sequence Ontology Term

Identifier Name Description
transcript