WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F02E9.9b.1 Sequence Name  F02E9.9b.1
Length (nt)  2252   Chromosome Location  I: 8430098-8435865
Chromosome . Primary Identifier  I Chromosome Location . Start  8430098
Chromosome Location . End  8435865 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F02E9.9b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008532 dpt-1 F02E9.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F02E9.9b F02E9.9b 2238   I: 8430098-8430307

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F02E9.9b.1 8430098 8435865 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22010   210   I: 8430098-8430307 Caenorhabditis elegans
Exon22013   152   I: 8430355-8430506 Caenorhabditis elegans
Exon22016   221   I: 8430574-8430794 Caenorhabditis elegans
Exon22019   125   I: 8430847-8430971 Caenorhabditis elegans
Exon22022   156   I: 8431020-8431175 Caenorhabditis elegans
Exon22025   104   I: 8431252-8431355 Caenorhabditis elegans
Exon22028   73   I: 8431399-8431471 Caenorhabditis elegans
Exon22031   122   I: 8431535-8431656 Caenorhabditis elegans
Exon22034   196   I: 8431702-8431897 Caenorhabditis elegans
Exon22037   267   I: 8432020-8432286 Caenorhabditis elegans
Exon22040   132   I: 8432334-8432465 Caenorhabditis elegans
Exon22043   131   I: 8432511-8432641 Caenorhabditis elegans
Exon22046   284   I: 8432697-8432980 Caenorhabditis elegans
Exon22054   79   I: 8435787-8435865 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F02E9.9b.1 8430098 8435865 -1

1 Sequence

Length
2252

1 Sequence Ontology Term

Identifier Name Description
transcript