WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F10D11.2.1 Sequence Name  F10D11.2.1
Length (nt)  1517   Chromosome Location  I: 8435958-8438608
Chromosome . Primary Identifier  I Chromosome Location . Start  8435958
Chromosome Location . End  8438608 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F10D11.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008648 F10D11.2 F10D11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F10D11.2 F10D11.2 1383   I: 8436070-8436132

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F10D11.2.1 8435958 8438608 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22055   175   I: 8435958-8436132 Caenorhabditis elegans
Exon22056   45   I: 8436181-8436225 Caenorhabditis elegans
Exon22057   81   I: 8436272-8436352 Caenorhabditis elegans
Exon22058   64   I: 8436409-8436472 Caenorhabditis elegans
Exon22059   68   I: 8436521-8436588 Caenorhabditis elegans
Exon22060   66   I: 8436795-8436860 Caenorhabditis elegans
Exon22061   228   I: 8436906-8437133 Caenorhabditis elegans
Exon22062   87   I: 8437488-8437574 Caenorhabditis elegans
Exon22063   189   I: 8437620-8437808 Caenorhabditis elegans
Exon22064   144   I: 8437853-8437996 Caenorhabditis elegans
Exon22065   207   I: 8438121-8438327 Caenorhabditis elegans
Exon22066   75   I: 8438376-8438450 Caenorhabditis elegans
Exon22067   88   I: 8438521-8438608 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F10D11.2.1 8435958 8438608 -1

1 Sequence

Length
1517

1 Sequence Ontology Term

Identifier Name Description
transcript