WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F10D11.6a.1 Sequence Name  F10D11.6a.1
Length (nt)  2867   Chromosome Location  I: 8445347-8451001
Chromosome . Primary Identifier  I Chromosome Location . Start  8445347
Chromosome Location . End  8451001 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F10D11.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008652 F10D11.6 F10D11.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F10D11.6a F10D11.6a 2454   I: 8445753-8445923

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F10D11.6a.1 8445347 8451001 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22081   577   I: 8445347-8445923 Caenorhabditis elegans
Exon22083   239   I: 8446210-8446448 Caenorhabditis elegans
Exon22085   132   I: 8446498-8446629 Caenorhabditis elegans
Exon22087   679   I: 8446831-8447509 Caenorhabditis elegans
Exon22089   399   I: 8447793-8448191 Caenorhabditis elegans
Exon22091   180   I: 8448549-8448728 Caenorhabditis elegans
Exon22094   229   I: 8448783-8449011 Caenorhabditis elegans
Exon22095   122   I: 8449378-8449499 Caenorhabditis elegans
Exon22096   166   I: 8450646-8450811 Caenorhabditis elegans
Exon22097   144   I: 8450858-8451001 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F10D11.6a.1 8445347 8451001 -1

1 Sequence

Length
2867

1 Sequence Ontology Term

Identifier Name Description
transcript