WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K02B12.5.1 Sequence Name  K02B12.5.1
Length (nt)  3678   Chromosome Location  I: 8517453-8526621
Chromosome . Primary Identifier  I Chromosome Location . Start  8517453
Chromosome Location . End  8526621 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K02B12.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010498 tnsl-1 K02B12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K02B12.5 K02B12.5 3597   I: 8517534-8517722

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K02B12.5.1 8517453 8526621 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22237   270   I: 8517453-8517722 Caenorhabditis elegans
Exon22238   140   I: 8517770-8517909 Caenorhabditis elegans
Exon22239   175   I: 8517960-8518134 Caenorhabditis elegans
Exon22240   107   I: 8518179-8518285 Caenorhabditis elegans
Exon22241   162   I: 8518335-8518496 Caenorhabditis elegans
Exon22249   218   I: 8521968-8522185 Caenorhabditis elegans
Exon22250   162   I: 8522230-8522391 Caenorhabditis elegans
Exon22251   243   I: 8522444-8522686 Caenorhabditis elegans
Exon22252   140   I: 8522858-8522997 Caenorhabditis elegans
Exon22253   142   I: 8523045-8523186 Caenorhabditis elegans
Exon22254   305   I: 8523448-8523752 Caenorhabditis elegans
Exon22255   137   I: 8523801-8523937 Caenorhabditis elegans
Exon22256   175   I: 8524401-8524575 Caenorhabditis elegans
Exon22257   114   I: 8524626-8524739 Caenorhabditis elegans
Exon22258   145   I: 8524952-8525096 Caenorhabditis elegans
Exon22259   193   I: 8525146-8525338 Caenorhabditis elegans
Exon22260   121   I: 8525385-8525505 Caenorhabditis elegans
Exon22261   145   I: 8525560-8525704 Caenorhabditis elegans
Exon22262   86   I: 8525753-8525838 Caenorhabditis elegans
Exon22263   347   I: 8525890-8526236 Caenorhabditis elegans
Exon22264   117   I: 8526419-8526535 Caenorhabditis elegans
Exon22265   34   I: 8526588-8526621 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K02B12.5.1 8517453 8526621 -1

1 Sequence

Length
3678

1 Sequence Ontology Term

Identifier Name Description
transcript