WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01H8.5d.2 Sequence Name  T01H8.5d.2
Length (nt)  6365   Chromosome Location  I: 8549513-8564350
Chromosome . Primary Identifier  I Chromosome Location . Start  8549513
Chromosome Location . End  8564350 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01H8.5d.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001651 gon-2 T01H8.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01H8.5d T01H8.5d 5796   I: 8549949-8550071

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01H8.5d.2 8549513 8564350 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

26 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22307   559   I: 8549513-8550071 Caenorhabditis elegans
Exon22315   237   I: 8550123-8550359 Caenorhabditis elegans
Exon22320   733   I: 8550410-8551142 Caenorhabditis elegans
Exon22325   133   I: 8551193-8551325 Caenorhabditis elegans
Exon22330   142   I: 8551375-8551516 Caenorhabditis elegans
Exon22335   64   I: 8551836-8551899 Caenorhabditis elegans
Exon22340   160   I: 8551956-8552115 Caenorhabditis elegans
Exon22345   311   I: 8552196-8552506 Caenorhabditis elegans
Exon22350   125   I: 8552877-8553001 Caenorhabditis elegans
Exon22355   201   I: 8553054-8553254 Caenorhabditis elegans
Exon22360   77   I: 8553313-8553389 Caenorhabditis elegans
Exon22365   111   I: 8553435-8553545 Caenorhabditis elegans
Exon22370   638   I: 8553819-8554456 Caenorhabditis elegans
Exon22375   317   I: 8555048-8555364 Caenorhabditis elegans
Exon22380   358   I: 8555417-8555774 Caenorhabditis elegans
Exon22385   218   I: 8556176-8556393 Caenorhabditis elegans
Exon22390   289   I: 8556444-8556732 Caenorhabditis elegans
Exon22395   243   I: 8557201-8557443 Caenorhabditis elegans
Exon22400   321   I: 8557486-8557806 Caenorhabditis elegans
Exon22406   145   I: 8557851-8557995 Caenorhabditis elegans
Exon22410   85   I: 8558390-8558474 Caenorhabditis elegans
Exon22414   237   I: 8558524-8558760 Caenorhabditis elegans
Exon22418   264   I: 8559370-8559633 Caenorhabditis elegans
Exon22424   149   I: 8563611-8563759 Caenorhabditis elegans
Exon22429   115   I: 8564024-8564138 Caenorhabditis elegans
Exon22430   133   I: 8564218-8564350 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01H8.5d.2 8549513 8564350 -1

1 Sequence

Length
6365

1 Sequence Ontology Term

Identifier Name Description
transcript