WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01H8.5a.1 Sequence Name  T01H8.5a.1
Length (nt)  6570   Chromosome Location  I: 8549519-8570998
Chromosome . Primary Identifier  I Chromosome Location . Start  8549519
Chromosome Location . End  8570998 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01H8.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001651 gon-2 T01H8.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01H8.5a T01H8.5a 6099   I: 8549949-8550071

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01H8.5a.1 8549519 8570998 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

29 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22309   553   I: 8549519-8550071 Caenorhabditis elegans
Exon22312   237   I: 8550123-8550359 Caenorhabditis elegans
Exon22317   733   I: 8550410-8551142 Caenorhabditis elegans
Exon22322   133   I: 8551193-8551325 Caenorhabditis elegans
Exon22327   142   I: 8551375-8551516 Caenorhabditis elegans
Exon22332   64   I: 8551836-8551899 Caenorhabditis elegans
Exon22337   160   I: 8551956-8552115 Caenorhabditis elegans
Exon22342   311   I: 8552196-8552506 Caenorhabditis elegans
Exon22347   125   I: 8552877-8553001 Caenorhabditis elegans
Exon22352   201   I: 8553054-8553254 Caenorhabditis elegans
Exon22357   77   I: 8553313-8553389 Caenorhabditis elegans
Exon22362   111   I: 8553435-8553545 Caenorhabditis elegans
Exon22367   638   I: 8553819-8554456 Caenorhabditis elegans
Exon22372   317   I: 8555048-8555364 Caenorhabditis elegans
Exon22377   358   I: 8555417-8555774 Caenorhabditis elegans
Exon22382   218   I: 8556176-8556393 Caenorhabditis elegans
Exon22387   289   I: 8556444-8556732 Caenorhabditis elegans
Exon22392   243   I: 8557201-8557443 Caenorhabditis elegans
Exon22397   321   I: 8557486-8557806 Caenorhabditis elegans
Exon22403   145   I: 8557851-8557995 Caenorhabditis elegans
Exon22407   85   I: 8558390-8558474 Caenorhabditis elegans
Exon22411   237   I: 8558524-8558760 Caenorhabditis elegans
Exon22415   264   I: 8559370-8559633 Caenorhabditis elegans
Exon22420   149   I: 8563611-8563759 Caenorhabditis elegans
Exon22425   115   I: 8564024-8564138 Caenorhabditis elegans
Exon22432   139   I: 8566056-8566194 Caenorhabditis elegans
Exon22435   62   I: 8566965-8567026 Caenorhabditis elegans
Exon22438   66   I: 8567075-8567140 Caenorhabditis elegans
Exon22444   77   I: 8570922-8570998 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01H8.5a.1 8549519 8570998 -1

1 Sequence

Length
6570

1 Sequence Ontology Term

Identifier Name Description
transcript