WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01H8.5e.1 Sequence Name  T01H8.5e.1
Length (nt)  4881   Chromosome Location  I: 8549949-8557930
Chromosome . Primary Identifier  I Chromosome Location . Start  8549949
Chromosome Location . End  8557930 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01H8.5e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001651 gon-2 T01H8.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01H8.5e T01H8.5e 4881   I: 8549949-8550071

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01H8.5e.1 8549949 8557930 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22310   123   I: 8549949-8550071 Caenorhabditis elegans
Exon22316   237   I: 8550123-8550359 Caenorhabditis elegans
Exon22321   733   I: 8550410-8551142 Caenorhabditis elegans
Exon22326   133   I: 8551193-8551325 Caenorhabditis elegans
Exon22331   142   I: 8551375-8551516 Caenorhabditis elegans
Exon22336   64   I: 8551836-8551899 Caenorhabditis elegans
Exon22341   160   I: 8551956-8552115 Caenorhabditis elegans
Exon22346   311   I: 8552196-8552506 Caenorhabditis elegans
Exon22351   125   I: 8552877-8553001 Caenorhabditis elegans
Exon22356   201   I: 8553054-8553254 Caenorhabditis elegans
Exon22361   77   I: 8553313-8553389 Caenorhabditis elegans
Exon22366   111   I: 8553435-8553545 Caenorhabditis elegans
Exon22371   638   I: 8553819-8554456 Caenorhabditis elegans
Exon22376   317   I: 8555048-8555364 Caenorhabditis elegans
Exon22381   358   I: 8555417-8555774 Caenorhabditis elegans
Exon22386   218   I: 8556176-8556393 Caenorhabditis elegans
Exon22391   289   I: 8556444-8556732 Caenorhabditis elegans
Exon22396   243   I: 8557201-8557443 Caenorhabditis elegans
Exon22401   321   I: 8557486-8557806 Caenorhabditis elegans
Exon22402   80   I: 8557851-8557930 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01H8.5e.1 8549949 8557930 -1

1 Sequence

Length
4881

1 Sequence Ontology Term

Identifier Name Description
transcript