WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01H8.5c.1 Sequence Name  T01H8.5c.1
Length (nt)  5916   Chromosome Location  I: 8549949-8566175
Chromosome . Primary Identifier  I Chromosome Location . Start  8549949
Chromosome Location . End  8566175 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01H8.5c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001651 gon-2 T01H8.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01H8.5c T01H8.5c 5916   I: 8549949-8550071

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01H8.5c.1 8549949 8566175 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

26 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22311   123   I: 8549949-8550071 Caenorhabditis elegans
Exon22313   237   I: 8550123-8550359 Caenorhabditis elegans
Exon22318   733   I: 8550410-8551142 Caenorhabditis elegans
Exon22323   133   I: 8551193-8551325 Caenorhabditis elegans
Exon22328   142   I: 8551375-8551516 Caenorhabditis elegans
Exon22333   64   I: 8551836-8551899 Caenorhabditis elegans
Exon22338   160   I: 8551956-8552115 Caenorhabditis elegans
Exon22343   311   I: 8552196-8552506 Caenorhabditis elegans
Exon22348   125   I: 8552877-8553001 Caenorhabditis elegans
Exon22353   201   I: 8553054-8553254 Caenorhabditis elegans
Exon22358   77   I: 8553313-8553389 Caenorhabditis elegans
Exon22363   111   I: 8553435-8553545 Caenorhabditis elegans
Exon22368   638   I: 8553819-8554456 Caenorhabditis elegans
Exon22373   317   I: 8555048-8555364 Caenorhabditis elegans
Exon22378   358   I: 8555417-8555774 Caenorhabditis elegans
Exon22383   218   I: 8556176-8556393 Caenorhabditis elegans
Exon22388   289   I: 8556444-8556732 Caenorhabditis elegans
Exon22393   243   I: 8557201-8557443 Caenorhabditis elegans
Exon22398   321   I: 8557486-8557806 Caenorhabditis elegans
Exon22404   145   I: 8557851-8557995 Caenorhabditis elegans
Exon22408   85   I: 8558390-8558474 Caenorhabditis elegans
Exon22412   237   I: 8558524-8558760 Caenorhabditis elegans
Exon22416   264   I: 8559370-8559633 Caenorhabditis elegans
Exon22422   149   I: 8563611-8563759 Caenorhabditis elegans
Exon22427   115   I: 8564024-8564138 Caenorhabditis elegans
Exon22431   120   I: 8566056-8566175 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01H8.5c.1 8549949 8566175 -1

1 Sequence

Length
5916

1 Sequence Ontology Term

Identifier Name Description
transcript