WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01H8.1b.1 Sequence Name  T01H8.1b.1
Length (nt)  2868   Chromosome Location  I: 8573854-8578076
Chromosome . Primary Identifier  I Chromosome Location . Start  8573854
Chromosome Location . End  8578076 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01H8.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011352 rskn-1 T01H8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01H8.1b T01H8.1b 2184   I: 8574339-8574339

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01H8.1b.1 8573854 8578076 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22454   486   I: 8573854-8574339 Caenorhabditis elegans
Exon22457   143   I: 8574433-8574575 Caenorhabditis elegans
Exon22463   360   I: 8574813-8575172 Caenorhabditis elegans
Exon22468   244   I: 8575222-8575465 Caenorhabditis elegans
Exon22473   233   I: 8575517-8575749 Caenorhabditis elegans
Exon22478   421   I: 8575797-8576217 Caenorhabditis elegans
Exon22483   71   I: 8576264-8576334 Caenorhabditis elegans
Exon22488   181   I: 8576379-8576559 Caenorhabditis elegans
Exon22493   187   I: 8576608-8576794 Caenorhabditis elegans
Exon22498   163   I: 8576845-8577007 Caenorhabditis elegans
Exon22503   117   I: 8577058-8577174 Caenorhabditis elegans
Exon22507   262   I: 8577815-8578076 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01H8.1b.1 8573854 8578076 -1

1 Sequence

Length
2868

1 Sequence Ontology Term

Identifier Name Description
transcript