WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01H8.1e.1 Sequence Name  T01H8.1e.1
Length (nt)  2835   Chromosome Location  I: 8573859-8580107
Chromosome . Primary Identifier  I Chromosome Location . Start  8573859
Chromosome Location . End  8580107 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01H8.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011352 rskn-1 T01H8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01H8.1e T01H8.1e 2415   I: 8574273-8574345

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01H8.1e.1 8573859 8580107 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22455   487   I: 8573859-8574345 Caenorhabditis elegans
Exon22459   149   I: 8574433-8574581 Caenorhabditis elegans
Exon22465   360   I: 8574813-8575172 Caenorhabditis elegans
Exon22471   244   I: 8575222-8575465 Caenorhabditis elegans
Exon22476   233   I: 8575517-8575749 Caenorhabditis elegans
Exon22481   421   I: 8575797-8576217 Caenorhabditis elegans
Exon22486   71   I: 8576264-8576334 Caenorhabditis elegans
Exon22491   181   I: 8576379-8576559 Caenorhabditis elegans
Exon22496   187   I: 8576608-8576794 Caenorhabditis elegans
Exon22501   163   I: 8576845-8577007 Caenorhabditis elegans
Exon22506   117   I: 8577058-8577174 Caenorhabditis elegans
Exon22510   117   I: 8578787-8578903 Caenorhabditis elegans
Exon22512   105   I: 8580003-8580107 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01H8.1e.1 8573859 8580107 -1

1 Sequence

Length
2835

1 Sequence Ontology Term

Identifier Name Description
transcript