WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01H8.1d.1 Sequence Name  T01H8.1d.1
Length (nt)  2244   Chromosome Location  I: 8574482-8579505
Chromosome . Primary Identifier  I Chromosome Location . Start  8574482
Chromosome Location . End  8579505 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01H8.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011352 rskn-1 T01H8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01H8.1d T01H8.1d 2205   I: 8574482-8574575

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01H8.1d.1 8574482 8579505 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22460   94   I: 8574482-8574575 Caenorhabditis elegans
Exon22461   104   I: 8574813-8574916 Caenorhabditis elegans
Exon22466   213   I: 8574960-8575172 Caenorhabditis elegans
Exon22470   244   I: 8575222-8575465 Caenorhabditis elegans
Exon22475   233   I: 8575517-8575749 Caenorhabditis elegans
Exon22480   421   I: 8575797-8576217 Caenorhabditis elegans
Exon22485   71   I: 8576264-8576334 Caenorhabditis elegans
Exon22490   181   I: 8576379-8576559 Caenorhabditis elegans
Exon22495   187   I: 8576608-8576794 Caenorhabditis elegans
Exon22500   163   I: 8576845-8577007 Caenorhabditis elegans
Exon22505   117   I: 8577058-8577174 Caenorhabditis elegans
Exon22509   117   I: 8578787-8578903 Caenorhabditis elegans
Exon22511   99   I: 8579407-8579505 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01H8.1d.1 8574482 8579505 -1

1 Sequence

Length
2244

1 Sequence Ontology Term

Identifier Name Description
transcript