WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R05D11.3.1 Sequence Name  R05D11.3.1
Length (nt)  635   Chromosome Location  I: 8591215-8591978
Chromosome . Primary Identifier  I Chromosome Location . Start  8591215
Chromosome Location . End  8591978 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R05D11.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004305 ran-4 R05D11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R05D11.3 R05D11.3 402   I: 8591217-8591313

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R05D11.3.1 8591215 8591978 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22521   99   I: 8591215-8591313 Caenorhabditis elegans
Exon22522   92   I: 8591355-8591446 Caenorhabditis elegans
Exon22523   99   I: 8591490-8591588 Caenorhabditis elegans
Exon22524   345   I: 8591634-8591978 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R05D11.3.1 8591215 8591978 1

1 Sequence

Length
635

1 Sequence Ontology Term

Identifier Name Description
transcript