WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R05D11.9.1 Sequence Name  R05D11.9.1
Length (nt)  2080   Chromosome Location  I: 8593027-8596225
Chromosome . Primary Identifier  I Chromosome Location . Start  8593027
Chromosome Location . End  8596225 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R05D11.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011037 R05D11.9 R05D11.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R05D11.9 R05D11.9 1923   I: 8593029-8593157

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R05D11.9.1 8593027 8596225 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22529   131   I: 8593027-8593157 Caenorhabditis elegans
Exon22530   201   I: 8593208-8593408 Caenorhabditis elegans
Exon22531   193   I: 8593457-8593649 Caenorhabditis elegans
Exon22532   133   I: 8594043-8594175 Caenorhabditis elegans
Exon22533   173   I: 8594221-8594393 Caenorhabditis elegans
Exon22534   335   I: 8594443-8594777 Caenorhabditis elegans
Exon22535   194   I: 8595114-8595307 Caenorhabditis elegans
Exon22536   129   I: 8595359-8595487 Caenorhabditis elegans
Exon22537   158   I: 8595542-8595699 Caenorhabditis elegans
Exon22538   119   I: 8595745-8595863 Caenorhabditis elegans
Exon22539   314   I: 8595912-8596225 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R05D11.9.1 8593027 8596225 1

1 Sequence

Length
2080

1 Sequence Ontology Term

Identifier Name Description
transcript