WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F43G9.6b.1 Sequence Name  F43G9.6b.1
Length (nt)  5724   Chromosome Location  I: 8623156-8630338
Chromosome . Primary Identifier  I Chromosome Location . Start  8623156
Chromosome Location . End  8630338 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F43G9.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001414 fer-1 F43G9.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F43G9.6b F43G9.6b 5724   I: 8623156-8623365

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F43G9.6b.1 8623156 8630338 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22639   210   I: 8623156-8623365 Caenorhabditis elegans
Exon22641   249   I: 8623414-8623662 Caenorhabditis elegans
Exon22643   182   I: 8623711-8623892 Caenorhabditis elegans
Exon22645   221   I: 8623940-8624160 Caenorhabditis elegans
Exon22647   197   I: 8624265-8624461 Caenorhabditis elegans
Exon22649   391   I: 8624531-8624921 Caenorhabditis elegans
Exon22651   750   I: 8624972-8625721 Caenorhabditis elegans
Exon22653   182   I: 8625863-8626044 Caenorhabditis elegans
Exon22655   264   I: 8626092-8626355 Caenorhabditis elegans
Exon22657   604   I: 8626402-8627005 Caenorhabditis elegans
Exon22659   98   I: 8627053-8627150 Caenorhabditis elegans
Exon22661   639   I: 8627288-8627926 Caenorhabditis elegans
Exon22663   385   I: 8627978-8628362 Caenorhabditis elegans
Exon22665   422   I: 8628406-8628827 Caenorhabditis elegans
Exon22668   112   I: 8629090-8629201 Caenorhabditis elegans
Exon22670   209   I: 8629248-8629456 Caenorhabditis elegans
Exon22672   216   I: 8629585-8629800 Caenorhabditis elegans
Exon22675   285   I: 8629847-8630131 Caenorhabditis elegans
Exon22676   108   I: 8630231-8630338 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F43G9.6b.1 8623156 8630338 -1

1 Sequence

Length
5724

1 Sequence Ontology Term

Identifier Name Description
transcript