WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F43G9.12a.1 Sequence Name  F43G9.12a.1
Length (nt)  2626   Chromosome Location  I: 8640508-8644399
Chromosome . Primary Identifier  I Chromosome Location . Start  8640508
Chromosome Location . End  8644399 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F43G9.12a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009672 mog-7 F43G9.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F43G9.12a F43G9.12a 2430   I: 8640527-8640628

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F43G9.12a.1 8640508 8644399 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22701   121   I: 8640508-8640628 Caenorhabditis elegans
Exon22702   738   I: 8640680-8641417 Caenorhabditis elegans
Exon22703   139   I: 8641471-8641609 Caenorhabditis elegans
Exon22704   155   I: 8641654-8641808 Caenorhabditis elegans
Exon22705   272   I: 8641861-8642132 Caenorhabditis elegans
Exon22706   316   I: 8642714-8643029 Caenorhabditis elegans
Exon22708   145   I: 8643075-8643219 Caenorhabditis elegans
Exon22710   254   I: 8643302-8643555 Caenorhabditis elegans
Exon22712   260   I: 8643866-8644125 Caenorhabditis elegans
Exon22715   226   I: 8644174-8644399 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F43G9.12a.1 8640508 8644399 1

1 Sequence

Length
2626

1 Sequence Ontology Term

Identifier Name Description
transcript