WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:VF39H2L.1 Sequence Name  VF39H2L.1
Length (nt)  753   Chromosome Location  I: 8644499-8644600
Chromosome . Primary Identifier  I Chromosome Location . Start  8644499
Chromosome Location . End  8644600
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
VF39H2L.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE18300 SYX-17 27.5 250 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00054469
WBRNAi00004351
WBRNAi00019433
WBRNAi00076727
WBRNAi00036119
WBRNAi00110507
WBRNAi00063803
WBRNAi00110521
WBRNAi00088626
WBRNAi00088733
WBRNAi00069909
WBRNAi00110496

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:VF39H2L.1 8644499 8644600 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012150 syx-17 VF39H2L.1 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:VF39H2L.1 8644499 8644600 1
CDS:VF39H2L.1 8644700 8644815 1
CDS:VF39H2L.1 8644864 8644983 1
CDS:VF39H2L.1 8645028 8645283 1
CDS:VF39H2L.1 8645886 8645997 1
CDS:VF39H2L.1 8646072 8646118 1

1 Sequence

Length
753

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:VF39H2L.1.1 VF39H2L.1.1 978   I: 8644460-8646304