WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F39H2.5 Sequence Name  F39H2.5
Length (nt)  1827   Chromosome Location  I: 8660837-8661015
Chromosome . Primary Identifier  I Chromosome Location . Start  8660837
Chromosome Location . End  8661015
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F39H2.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30531 MRT-1 69.0 608 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00046806
WBRNAi00003642
WBRNAi00007733
WBRNAi00077840

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F39H2.5 8660837 8661015 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00045237 mrt-1 F39H2.5 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:F39H2.5 8660837 8661015 1
CDS:F39H2.5 8661063 8661231 1
CDS:F39H2.5 8661282 8661619 1
CDS:F39H2.5 8661669 8661800 1
CDS:F39H2.5 8661850 8662185 1
CDS:F39H2.5 8662241 8662459 1
CDS:F39H2.5 8662506 8662760 1
CDS:F39H2.5 8662861 8663059 1

1 Sequence

Length
1827

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F39H2.5.1 F39H2.5.1 1879   I: 8660831-8663105